Cluster: HRGMv2_2823_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2823
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2823_6 | HRGMv2_2823_6_24 | 42109 | 43701 | + | GH43_35 |
| CAZyme | HRGMv2_2823_6 | HRGMv2_2823_6_25 | 43767 | 46376 | - | GH9 |
| pfam | HRGMv2_2823_6 | HRGMv2_2823_6_26 | 46498 | 47010 | - | DNA_binding_1 | Methyltransf_1N |
| peptidase | HRGMv2_2823_6 | HRGMv2_2823_6_27 | 47075 | 47488 | - | M67.UPB |
| TC | HRGMv2_2823_6 | HRGMv2_2823_6_28 | 47488 | 48297 | - | 3.A.25.2.1 |
Gene ID: HRGMv2_2823_6_24
Type: CAZyme
Location: 42109 - 43701 (+)
Type: CAZyme
Location: 42109 - 43701 (+)
Gene ID: HRGMv2_2823_6_25
Type: CAZyme
Location: 43767 - 46376 (-)
Type: CAZyme
Location: 43767 - 46376 (-)
Gene ID: HRGMv2_2823_6_26
Type: pfam
Location: 46498 - 47010 (-)
Type: pfam
Location: 46498 - 47010 (-)
Gene ID: HRGMv2_2823_6_27
Type: peptidase
Location: 47075 - 47488 (-)
Type: peptidase
Location: 47075 - 47488 (-)
Gene ID: HRGMv2_2823_6_28
Type: TC
Location: 47488 - 48297 (-)
Type: TC
Location: 47488 - 48297 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas sp900554975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2823_6_28 | vegan > omnivore | 1.05624 | 0.01057 |