Cluster: HRGMv2_2823_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2823
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2823_89 | HRGMv2_2823_89_1 | 61 | 2049 | - | GH24 |
| pfam | HRGMv2_2823_89 | HRGMv2_2823_89_2 | 2046 | 2750 | - | Dockerin_1 | Cohesin |
| pfam | HRGMv2_2823_89 | HRGMv2_2823_89_3 | 2925 | 3392 | - | tRNA_edit |
| TC | HRGMv2_2823_89 | HRGMv2_2823_89_4 | 3411 | 4778 | - | 2.A.40.7.6 |
Gene ID: HRGMv2_2823_89_1
Type: CAZyme
Location: 61 - 2049 (-)
Type: CAZyme
Location: 61 - 2049 (-)
Gene ID: HRGMv2_2823_89_2
Type: pfam
Location: 2046 - 2750 (-)
Type: pfam
Location: 2046 - 2750 (-)
Gene ID: HRGMv2_2823_89_3
Type: pfam
Location: 2925 - 3392 (-)
Type: pfam
Location: 2925 - 3392 (-)
Gene ID: HRGMv2_2823_89_4
Type: TC
Location: 3411 - 4778 (-)
Type: TC
Location: 3411 - 4778 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas sp900554975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.