Cluster: HRGMv2_2823_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2823
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2823_64 | HRGMv2_2823_64_4 | 3626 | 4525 | + | 3.A.1.1.20 |
| TC | HRGMv2_2823_64 | HRGMv2_2823_64_5 | 4497 | 5348 | + | 3.A.1.1.20 |
| TC | HRGMv2_2823_64 | HRGMv2_2823_64_6 | 5352 | 6446 | + | 3.A.1.1.27 |
| CAZyme | HRGMv2_2823_64 | HRGMv2_2823_64_7 | 6460 | 7758 | + | GH32 |
Gene ID: HRGMv2_2823_64_4
Type: TC
Location: 3626 - 4525 (+)
Type: TC
Location: 3626 - 4525 (+)
Gene ID: HRGMv2_2823_64_5
Type: TC
Location: 4497 - 5348 (+)
Type: TC
Location: 4497 - 5348 (+)
Gene ID: HRGMv2_2823_64_6
Type: TC
Location: 5352 - 6446 (+)
Type: TC
Location: 5352 - 6446 (+)
Gene ID: HRGMv2_2823_64_7
Type: CAZyme
Location: 6460 - 7758 (+)
Type: CAZyme
Location: 6460 - 7758 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas sp900554975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2823_64_4 | vegan > omnivore | 1.75033 | 0.01057 |
| HRGMv2_2823_64_5 | vegan > omnivore | 1.96999 | 0.01057 |
| HRGMv2_2823_64_6 | vegan > omnivore | 1.69606 | 0.01057 |
| HRGMv2_2823_64_7 | vegan > omnivore | 1.89280 | 0.01057 |