Cluster: HRGMv2_2823_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2823
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2823_25 | HRGMv2_2823_25_2 | 2353 | 3294 | - | GH25 |
| pfam | HRGMv2_2823_25 | HRGMv2_2823_25_3 | 3465 | 4067 | - | Cytidylate_kin2 |
| TC | HRGMv2_2823_25 | HRGMv2_2823_25_4 | 4083 | 5894 | - | 3.A.1.135.6 |
| TC | HRGMv2_2823_25 | HRGMv2_2823_25_5 | 5887 | 7656 | - | 3.A.1.135.6 |
| TF | HRGMv2_2823_25 | HRGMv2_2823_25_6 | 7691 | 8125 | - | MarR |
| pfam | HRGMv2_2823_25 | HRGMv2_2823_25_7 | 8355 | 11552 | - | Dockerin_1 | Cthe_2159 | Cthe_2159 |
| CAZyme | HRGMv2_2823_25 | HRGMv2_2823_25_8 | 11732 | 14866 | - | CBM4 | GH16_21 | GH9 |
Gene ID: HRGMv2_2823_25_2
Type: CAZyme
Location: 2353 - 3294 (-)
Type: CAZyme
Location: 2353 - 3294 (-)
Gene ID: HRGMv2_2823_25_3
Type: pfam
Location: 3465 - 4067 (-)
Type: pfam
Location: 3465 - 4067 (-)
Gene ID: HRGMv2_2823_25_4
Type: TC
Location: 4083 - 5894 (-)
Type: TC
Location: 4083 - 5894 (-)
Gene ID: HRGMv2_2823_25_5
Type: TC
Location: 5887 - 7656 (-)
Type: TC
Location: 5887 - 7656 (-)
Gene ID: HRGMv2_2823_25_6
Type: TF
Location: 7691 - 8125 (-)
Type: TF
Location: 7691 - 8125 (-)
Gene ID: HRGMv2_2823_25_7
Type: pfam
Location: 8355 - 11552 (-)
Type: pfam
Location: 8355 - 11552 (-)
Gene ID: HRGMv2_2823_25_8
Type: CAZyme
Location: 11732 - 14866 (-)
Type: CAZyme
Location: 11732 - 14866 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas sp900554975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.