Cluster: HRGMv2_2823_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2823
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2823_23 | HRGMv2_2823_23_28 | 23726 | 24466 | + | CE4 |
| STP | HRGMv2_2823_23 | HRGMv2_2823_23_29 | 24848 | 26167 | - | HD |
| CAZyme | HRGMv2_2823_23 | HRGMv2_2823_23_30 | 26388 | 28367 | - | GH31_1 |
| TF | HRGMv2_2823_23 | HRGMv2_2823_23_31 | 28521 | 29387 | + | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_2823_23 | HRGMv2_2823_23_32 | 29394 | 30515 | - | NTP_transf_5 |
| TC | HRGMv2_2823_23 | HRGMv2_2823_23_33 | 30861 | 32264 | + | 9.B.160.1.10 |
Gene ID: HRGMv2_2823_23_28
Type: CAZyme
Location: 23726 - 24466 (+)
Type: CAZyme
Location: 23726 - 24466 (+)
Gene ID: HRGMv2_2823_23_29
Type: STP
Location: 24848 - 26167 (-)
Type: STP
Location: 24848 - 26167 (-)
Gene ID: HRGMv2_2823_23_30
Type: CAZyme
Location: 26388 - 28367 (-)
Type: CAZyme
Location: 26388 - 28367 (-)
Gene ID: HRGMv2_2823_23_31
Type: TF
Location: 28521 - 29387 (+)
Type: TF
Location: 28521 - 29387 (+)
Gene ID: HRGMv2_2823_23_32
Type: pfam
Location: 29394 - 30515 (-)
Type: pfam
Location: 29394 - 30515 (-)
Gene ID: HRGMv2_2823_23_33
Type: TC
Location: 30861 - 32264 (+)
Type: TC
Location: 30861 - 32264 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas sp900554975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.