Cluster: HRGMv2_2823_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2823
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2823_22 | HRGMv2_2823_22_24 | 25115 | 26581 | + | 4.D.1.3.3 |
| pfam | HRGMv2_2823_22 | HRGMv2_2823_22_25 | 26593 | 28329 | + | TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N |
| pfam | HRGMv2_2823_22 | HRGMv2_2823_22_26 | 28337 | 29632 | + | FAD_binding_2 | FAD_binding_3 | Amino_oxidase | Pyr_redox_2 | NAD_binding_8 |
| CAZyme | HRGMv2_2823_22 | HRGMv2_2823_22_27 | 29671 | 32061 | - | GT4 |
Gene ID: HRGMv2_2823_22_24
Type: TC
Location: 25115 - 26581 (+)
Type: TC
Location: 25115 - 26581 (+)
Gene ID: HRGMv2_2823_22_25
Type: pfam
Location: 26593 - 28329 (+)
Type: pfam
Location: 26593 - 28329 (+)
Gene ID: HRGMv2_2823_22_26
Type: pfam
Location: 28337 - 29632 (+)
Type: pfam
Location: 28337 - 29632 (+)
Gene ID: HRGMv2_2823_22_27
Type: CAZyme
Location: 29671 - 32061 (-)
Type: CAZyme
Location: 29671 - 32061 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas sp900554975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.