Cluster: HRGMv2_2819_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2819
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2819_35 | HRGMv2_2819_35_164 | 183341 | 184693 | + | 3.A.1.1.3 |
| TC | HRGMv2_2819_35 | HRGMv2_2819_35_165 | 184708 | 185652 | + | 3.A.1.1.11 |
| TC | HRGMv2_2819_35 | HRGMv2_2819_35_166 | 185649 | 186491 | + | 3.A.1.1.25 |
| pfam | HRGMv2_2819_35 | HRGMv2_2819_35_167 | 186562 | 187170 | - | Flavin_Reduct |
| CAZyme | HRGMv2_2819_35 | HRGMv2_2819_35_168 | 187287 | 188249 | - | GT2 |
Gene ID: HRGMv2_2819_35_164
Type: TC
Location: 183341 - 184693 (+)
Type: TC
Location: 183341 - 184693 (+)
Gene ID: HRGMv2_2819_35_165
Type: TC
Location: 184708 - 185652 (+)
Type: TC
Location: 184708 - 185652 (+)
Gene ID: HRGMv2_2819_35_166
Type: TC
Location: 185649 - 186491 (+)
Type: TC
Location: 185649 - 186491 (+)
Gene ID: HRGMv2_2819_35_167
Type: pfam
Location: 186562 - 187170 (-)
Type: pfam
Location: 186562 - 187170 (-)
Gene ID: HRGMv2_2819_35_168
Type: CAZyme
Location: 187287 - 188249 (-)
Type: CAZyme
Location: 187287 - 188249 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.