Cluster: HRGMv2_2819_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2819
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2819_35 | HRGMv2_2819_35_117 | 129818 | 130618 | + | 3.A.1.17.4 |
| TC | HRGMv2_2819_35 | HRGMv2_2819_35_118 | 130632 | 131483 | + | 3.A.1.16.3 |
| pfam | HRGMv2_2819_35 | HRGMv2_2819_35_119 | 131525 | 132673 | + | NMT1 |
| NULL(UNKNOWN) | HRGMv2_2819_35 | HRGMv2_2819_35_120 | 132754 | 133569 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2819_35 | HRGMv2_2819_35_121 | 133596 | 134753 | + | CE9 |
Gene ID: HRGMv2_2819_35_117
Type: TC
Location: 129818 - 130618 (+)
Type: TC
Location: 129818 - 130618 (+)
Gene ID: HRGMv2_2819_35_118
Type: TC
Location: 130632 - 131483 (+)
Type: TC
Location: 130632 - 131483 (+)
Gene ID: HRGMv2_2819_35_119
Type: pfam
Location: 131525 - 132673 (+)
Type: pfam
Location: 131525 - 132673 (+)
Gene ID: HRGMv2_2819_35_120
Type:
Location: 132754 - 133569 (+)
Type:
Location: 132754 - 133569 (+)
Gene ID: HRGMv2_2819_35_121
Type: CAZyme
Location: 133596 - 134753 (+)
Type: CAZyme
Location: 133596 - 134753 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.