Cluster: HRGMv2_2819_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2819
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2819_28 | HRGMv2_2819_28_13 | 12317 | 13594 | - | 2.A.86.1.8 |
| pfam | HRGMv2_2819_28 | HRGMv2_2819_28_14 | 13707 | 14465 | - | HGSNAT_cat |
| pfam | HRGMv2_2819_28 | HRGMv2_2819_28_15 | 14462 | 15631 | - | tRNA-synt_2c | tRNA_SAD |
| CAZyme | HRGMv2_2819_28 | HRGMv2_2819_28_16 | 15818 | 17296 | + | GH77 |
Gene ID: HRGMv2_2819_28_13
Type: TC
Location: 12317 - 13594 (-)
Type: TC
Location: 12317 - 13594 (-)
Gene ID: HRGMv2_2819_28_14
Type: pfam
Location: 13707 - 14465 (-)
Type: pfam
Location: 13707 - 14465 (-)
Gene ID: HRGMv2_2819_28_15
Type: pfam
Location: 14462 - 15631 (-)
Type: pfam
Location: 14462 - 15631 (-)
Gene ID: HRGMv2_2819_28_16
Type: CAZyme
Location: 15818 - 17296 (+)
Type: CAZyme
Location: 15818 - 17296 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.