dbCAN Logo

Cluster: HRGMv2_2819_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2819_27 HRGMv2_2819_27_36 38518 39600 - 1.A.23.4.3
TC HRGMv2_2819_27 HRGMv2_2819_27_37 40034 40597 + 3.A.1.25.5
sulfatase HRGMv2_2819_27 HRGMv2_2819_27_38 40872 42017 + S1_2
pfam HRGMv2_2819_27 HRGMv2_2819_27_39 42267 43325 + Glycos_transf_2 | Glyco_tranf_2_3
CAZyme HRGMv2_2819_27 HRGMv2_2819_27_40 43341 45134 + GT2 | GT2
NULL(UNKNOWN) HRGMv2_2819_27 HRGMv2_2819_27_41 45188 45514 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2819_27 HRGMv2_2819_27_42 45542 46984 + Glycos_transf_2 | Glyco_tranf_2_2 | Glyco_tranf_2_3
TC HRGMv2_2819_27 HRGMv2_2819_27_43 47010 49220 + 3.A.7.16.1
Gene ID: HRGMv2_2819_27_36
Type: TC
Location: 38518 - 39600 (-)
Gene ID: HRGMv2_2819_27_37
Type: TC
Location: 40034 - 40597 (+)
Gene ID: HRGMv2_2819_27_38
Type: sulfatase
Location: 40872 - 42017 (+)
Gene ID: HRGMv2_2819_27_39
Type: pfam
Location: 42267 - 43325 (+)
Gene ID: HRGMv2_2819_27_40
Type: CAZyme
Location: 43341 - 45134 (+)
Gene ID: HRGMv2_2819_27_41
Type:
Location: 45188 - 45514 (+)
Gene ID: HRGMv2_2819_27_42
Type: pfam
Location: 45542 - 46984 (+)
Gene ID: HRGMv2_2819_27_43
Type: TC
Location: 47010 - 49220 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List