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Cluster: HRGMv2_2809_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2809_16 HRGMv2_2809_16_14 11409 12530 - CE9
NULL(UNKNOWN) HRGMv2_2809_16 HRGMv2_2809_16_15 12532 13905 - NULL(UNKNOWN)
[View Structural Homologs]
sulfatase HRGMv2_2809_16 HRGMv2_2809_16_16 13902 14651 - S1_9
TC HRGMv2_2809_16 HRGMv2_2809_16_17 14781 15995 - 2.A.79.1.4
CAZyme HRGMv2_2809_16 HRGMv2_2809_16_18 16205 16987 - CE4
NULL(UNKNOWN) HRGMv2_2809_16 HRGMv2_2809_16_19 17190 17516 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2809_16 HRGMv2_2809_16_20 17654 19345 + 2.A.35.2.1
Gene ID: HRGMv2_2809_16_14
Type: CAZyme
Location: 11409 - 12530 (-)
Gene ID: HRGMv2_2809_16_15
Type:
Location: 12532 - 13905 (-)
Gene ID: HRGMv2_2809_16_16
Type: sulfatase
Location: 13902 - 14651 (-)
Gene ID: HRGMv2_2809_16_17
Type: TC
Location: 14781 - 15995 (-)
Gene ID: HRGMv2_2809_16_18
Type: CAZyme
Location: 16205 - 16987 (-)
Gene ID: HRGMv2_2809_16_19
Type:
Location: 17190 - 17516 (+)
Gene ID: HRGMv2_2809_16_20
Type: TC
Location: 17654 - 19345 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2809_16_17 vegetarian > omnivore 1.76602 0.01135

🧭 Explore Read Mapping of CGC

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