dbCAN Logo

PROTEIN: HRGMv2_2809_16_15

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_2809_16_15.pdb
Genome ID:
HRGMv2_2809
Protein ID:
HRGMv2_2809_16_15

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MNVEHLGISF   HMETRPALDS   GFIPFAPWQA   AYLAEAHRPV   RIAVERQDGQ   AAVFETRLRD 60
DAHRAADLRF   LERTVKLLLW   CVGGWRVRIC   GCDELTQELA   RIYSPAGIRA   FDADFMETVF 120
QRPFVLEAVS   EANLPAPRSG   ARRIGGHWNG   CRIGFDAGGS   DRKVSAVIDG   KTVYSEEVVW 180
HPKTQTDPRY   HYEGILSAFR   AAASKMPRVD   GIGVSSAGVF   VGNAPMVSSL   FIQVPPEKRG 240
PIPTIYDRAA   AAMGDVPIVV   ANDGDVTALA   GAMSLRDSGV   MGLAMGTSEA   AGYVNREGCI 300
LGWFNELAFA   PVDLSPQAER   DEWSGDIGVG   CKYFSQDAVI   KLAPAAGIAL   AETLTPAEKL 360
SAVQVLAEGG   DERALAIFRD   IGVYLGHTLP   LYASVYDLKH   LLVLGRVASG   IGGQLIVSQC 420
RRVLAEEYPE   LTVSVTLPDE   QFRRMGQSMA   AASLPEV 457
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-I6Y8D3-F1-model_v4 150 457 1 302 0.7211 0.8779
AF-Q8ZLQ8-F1-model_v4 150 457 1 290 0.6999 0.869
AF-P45425-F1-model_v4 150 457 1 289 0.6987 0.8706
AF-Q8DNV3-F1-model_v4 149 457 1 294 0.6953 0.8562
AF-Q32BB7-F1-model_v4 148 457 10 302 0.6918 0.8679
AF-Q8ZRE5-F1-model_v4 151 457 1 302 0.6907 0.8425
AF-A0A0H3GKA4-F1-model_v4 151 457 1 302 0.6878 0.8419
AF-K0F0J8-F1-model_v4 150 457 1 293 0.6866 0.86
AF-A0A133CQB1-F1-model_v4 148 457 1 320 0.6828 0.8374
AF-Q8ZL71-F1-model_v4 149 457 1 290 0.6815 0.8491
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A165R9S5 GH13_31 148 457 78 373 0.5918 0.8312
AF-A0A7L4W925-F1-model_v4 GH170 149 446 1 294 0.4972 0.8246
A0A497ZP30 GH1 149 457 295 616 0.4739 0.7898
AF-A0A346SND6-F1-model_v4 GH1 149 457 452 773 0.4369 0.7935
AF-M4W6Q6-F1-model_v4 GH1 149 457 452 773 0.4332 0.7856
AF-A0A5P9GJS8-F1-model_v4 GH1 149 457 452 773 0.4327 0.7855
AF-A0A222W361-F1-model_v4 GT2 149 457 366 652 0.4314 0.7816
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A165R9S5 GH13_31 148 457 78 373 0.5918 0.8312
A0A7L4W925 GH170 149 446 1 294 0.4972 0.8246
A0A497ZP30 GH1 149 457 295 616 0.4739 0.7898
A0A5P9GJS8 GH1 149 457 452 773 0.4327 0.7855
A0A222W361 GT2 149 457 366 652 0.4314 0.7816
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2aa4-assembly1.cif.gz_B 150 457 1 289 0.7074 0.8777
3vov-assembly1.cif.gz_C 149 457 1 289 0.6933 0.8603
3vgk-assembly2.cif.gz_B 149 457 1 311 0.687 0.8343
3vov-assembly1.cif.gz_B 149 457 1 296 0.6869 0.8485
3vov-assembly1.cif.gz_D 150 457 1 295 0.6869 0.848
6jdo-assembly1.cif.gz_A 150 457 1 291 0.6856 0.852
2qm1-assembly1.cif.gz_B 147 457 3 322 0.6855 0.8452
6q26-assembly2.cif.gz_C 150 454 1 286 0.6772 0.8441
5nck-assembly1.cif.gz_B 150 457 1 288 0.6734 0.8424
4htl-assembly1.cif.gz_A 150 457 1 290 0.6695 0.8326
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A8AQB2-F1-model_v4 150 457 1 288 0.7048 0.8789
AF-Q1C5U9-F1-model_v4 149 457 1 290 0.7038 0.8719
AF-A7FG96-F1-model_v4 149 457 1 290 0.7036 0.8717
AF-Q8ZCG9-F1-model_v4 149 457 1 290 0.7034 0.8714
AF-B2K945-F1-model_v4 149 457 1 290 0.7031 0.8711
AF-Q668J9-F1-model_v4 149 457 1 290 0.7031 0.8711
AF-Q1CJY6-F1-model_v4 149 457 1 290 0.7031 0.8711
AF-B7MBY4-F1-model_v4 150 457 1 291 0.7031 0.8701
AF-B1IQQ7-F1-model_v4 150 457 1 291 0.703 0.87
AF-A9QZJ5-F1-model_v4 149 457 1 290 0.7029 0.8709
Download Full SwissProt Results