Cluster: HRGMv2_2807_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2807
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2807_7 | HRGMv2_2807_7_7 | 6262 | 6918 | - | 3.A.1.125.1 |
| pfam | HRGMv2_2807_7 | HRGMv2_2807_7_8 | 6942 | 8939 | - | FtsX |
| STP | HRGMv2_2807_7 | HRGMv2_2807_7_9 | 9245 | 11008 | - | cNMP_binding |
| CAZyme | HRGMv2_2807_7 | HRGMv2_2807_7_10 | 11023 | 12234 | - | GT4 |
Gene ID: HRGMv2_2807_7_7
Type: TC
Location: 6262 - 6918 (-)
Type: TC
Location: 6262 - 6918 (-)
Gene ID: HRGMv2_2807_7_8
Type: pfam
Location: 6942 - 8939 (-)
Type: pfam
Location: 6942 - 8939 (-)
Gene ID: HRGMv2_2807_7_9
Type: STP
Location: 9245 - 11008 (-)
Type: STP
Location: 9245 - 11008 (-)
Gene ID: HRGMv2_2807_7_10
Type: CAZyme
Location: 11023 - 12234 (-)
Type: CAZyme
Location: 11023 - 12234 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900545495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2807_7_9 | vegetarian > omnivore | 1.10836 | 0.00364 |
| HRGMv2_2807_7_10 | vegetarian > omnivore | 1.05443 | 0.00364 |