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Cluster: HRGMv2_2788_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2788_1 HRGMv2_2788_1_427 461144 462877 - 4.C.1.1.7
TC HRGMv2_2788_1 HRGMv2_2788_1_428 463024 463962 - 3.A.1.5.25
TC HRGMv2_2788_1 HRGMv2_2788_1_429 463964 465016 - 3.A.1.5.25
TC HRGMv2_2788_1 HRGMv2_2788_1_430 465033 466064 - 3.A.1.5.2
TC HRGMv2_2788_1 HRGMv2_2788_1_431 466064 467005 - 3.A.1.5.25
TC HRGMv2_2788_1 HRGMv2_2788_1_432 467216 469255 - 3.A.1.5.41
STP HRGMv2_2788_1 HRGMv2_2788_1_433 469504 470787 - Fer4 | Fer4
pfam HRGMv2_2788_1 HRGMv2_2788_1_434 470795 471778 - FKBP_C | Trigger_C
CAZyme HRGMv2_2788_1 HRGMv2_2788_1_435 472046 473998 - CBM48 | GH13_9
CAZyme HRGMv2_2788_1 HRGMv2_2788_1_436 474105 475463 + GH13_20
Gene ID: HRGMv2_2788_1_427
Type: TC
Location: 461144 - 462877 (-)
Gene ID: HRGMv2_2788_1_428
Type: TC
Location: 463024 - 463962 (-)
Gene ID: HRGMv2_2788_1_429
Type: TC
Location: 463964 - 465016 (-)
Gene ID: HRGMv2_2788_1_430
Type: TC
Location: 465033 - 466064 (-)
Gene ID: HRGMv2_2788_1_431
Type: TC
Location: 466064 - 467005 (-)
Gene ID: HRGMv2_2788_1_432
Type: TC
Location: 467216 - 469255 (-)
Gene ID: HRGMv2_2788_1_433
Type: STP
Location: 469504 - 470787 (-)
Gene ID: HRGMv2_2788_1_434
Type: pfam
Location: 470795 - 471778 (-)
Gene ID: HRGMv2_2788_1_435
Type: CAZyme
Location: 472046 - 473998 (-)
Gene ID: HRGMv2_2788_1_436
Type: CAZyme
Location: 474105 - 475463 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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