Cluster: HRGMv2_2788_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2788
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_343 | 364318 | 365610 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2788_1 | HRGMv2_2788_1_344 | 365635 | 366762 | + | GT28 |
| pfam | HRGMv2_2788_1 | HRGMv2_2788_1_345 | 366816 | 368366 | + | POTRA_1 |
| pfam | HRGMv2_2788_1 | HRGMv2_2788_1_346 | 368381 | 369859 | + | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_347 | 369925 | 372027 | - | 3.A.3.32.3 |
Gene ID: HRGMv2_2788_1_343
Type: TC
Location: 364318 - 365610 (+)
Type: TC
Location: 364318 - 365610 (+)
Gene ID: HRGMv2_2788_1_344
Type: CAZyme
Location: 365635 - 366762 (+)
Type: CAZyme
Location: 365635 - 366762 (+)
Gene ID: HRGMv2_2788_1_345
Type: pfam
Location: 366816 - 368366 (+)
Type: pfam
Location: 366816 - 368366 (+)
Gene ID: HRGMv2_2788_1_346
Type: pfam
Location: 368381 - 369859 (+)
Type: pfam
Location: 368381 - 369859 (+)
Gene ID: HRGMv2_2788_1_347
Type: TC
Location: 369925 - 372027 (-)
Type: TC
Location: 369925 - 372027 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_I
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.