Cluster: HRGMv2_2788_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2788
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2788_2 | HRGMv2_2788_2_89 | 93135 | 94712 | - | GH77 |
| pfam | HRGMv2_2788_2 | HRGMv2_2788_2_90 | 95047 | 96225 | + | tRNA-synt_2c | tRNA_SAD |
| pfam | HRGMv2_2788_2 | HRGMv2_2788_2_91 | 96257 | 97015 | + | Methyltransf_4 | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 |
| TC | HRGMv2_2788_2 | HRGMv2_2788_2_92 | 97031 | 98086 | + | 3.A.1.121.4 |
Gene ID: HRGMv2_2788_2_89
Type: CAZyme
Location: 93135 - 94712 (-)
Type: CAZyme
Location: 93135 - 94712 (-)
Gene ID: HRGMv2_2788_2_90
Type: pfam
Location: 95047 - 96225 (+)
Type: pfam
Location: 95047 - 96225 (+)
Gene ID: HRGMv2_2788_2_91
Type: pfam
Location: 96257 - 97015 (+)
Type: pfam
Location: 96257 - 97015 (+)
Gene ID: HRGMv2_2788_2_92
Type: TC
Location: 97031 - 98086 (+)
Type: TC
Location: 97031 - 98086 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_I
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.