Cluster: HRGMv2_2788_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2788
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2788_1 | HRGMv2_2788_1_2100 | 2284367 | 2286244 | - | GT2 | GT2 |
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_2101 | 2286248 | 2286991 | - | 3.A.1.103.1 |
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_2102 | 2287004 | 2287813 | - | 3.A.1.103.6 |
Gene ID: HRGMv2_2788_1_2100
Type: CAZyme
Location: 2284367 - 2286244 (-)
Type: CAZyme
Location: 2284367 - 2286244 (-)
Gene ID: HRGMv2_2788_1_2101
Type: TC
Location: 2286248 - 2286991 (-)
Type: TC
Location: 2286248 - 2286991 (-)
Gene ID: HRGMv2_2788_1_2102
Type: TC
Location: 2287004 - 2287813 (-)
Type: TC
Location: 2287004 - 2287813 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_I
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.