Cluster: HRGMv2_2788_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2788
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2788_1 | HRGMv2_2788_1_1691 | 1859939 | 1862455 | - | GH31_2 |
| CAZyme | HRGMv2_2788_1 | HRGMv2_2788_1_1692 | 1862482 | 1864977 | - | GH31_2 |
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_1693 | 1865108 | 1866427 | - | 2.A.56.1.5 |
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_1694 | 1866427 | 1866915 | - | 2.A.56.1.5 |
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_1695 | 1867024 | 1868073 | - | 2.A.56.1.5 |
Gene ID: HRGMv2_2788_1_1691
Type: CAZyme
Location: 1859939 - 1862455 (-)
Type: CAZyme
Location: 1859939 - 1862455 (-)
Gene ID: HRGMv2_2788_1_1692
Type: CAZyme
Location: 1862482 - 1864977 (-)
Type: CAZyme
Location: 1862482 - 1864977 (-)
Gene ID: HRGMv2_2788_1_1693
Type: TC
Location: 1865108 - 1866427 (-)
Type: TC
Location: 1865108 - 1866427 (-)
Gene ID: HRGMv2_2788_1_1694
Type: TC
Location: 1866427 - 1866915 (-)
Type: TC
Location: 1866427 - 1866915 (-)
Gene ID: HRGMv2_2788_1_1695
Type: TC
Location: 1867024 - 1868073 (-)
Type: TC
Location: 1867024 - 1868073 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_I
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.