Cluster: HRGMv2_2788_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2788
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2788_1 | HRGMv2_2788_1_1595 | 1736332 | 1738728 | + | GT35 |
| CAZyme | HRGMv2_2788_1 | HRGMv2_2788_1_1596 | 1738808 | 1740664 | + | GH13_39 |
| pfam | HRGMv2_2788_1 | HRGMv2_2788_1_1597 | 1740768 | 1741226 | + | NfeD |
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_1598 | 1741241 | 1742146 | + | 8.A.21.2.2 |
Gene ID: HRGMv2_2788_1_1595
Type: CAZyme
Location: 1736332 - 1738728 (+)
Type: CAZyme
Location: 1736332 - 1738728 (+)
Gene ID: HRGMv2_2788_1_1596
Type: CAZyme
Location: 1738808 - 1740664 (+)
Type: CAZyme
Location: 1738808 - 1740664 (+)
Gene ID: HRGMv2_2788_1_1597
Type: pfam
Location: 1740768 - 1741226 (+)
Type: pfam
Location: 1740768 - 1741226 (+)
Gene ID: HRGMv2_2788_1_1598
Type: TC
Location: 1741241 - 1742146 (+)
Type: TC
Location: 1741241 - 1742146 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_I
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.