Cluster: HRGMv2_2788_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2788
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_1472 | 1600615 | 1601961 | + | 3.A.1.1.45 |
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_1473 | 1602046 | 1602897 | + | 3.A.1.1.45 |
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_1474 | 1602897 | 1603739 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_2788_1 | HRGMv2_2788_1_1475 | 1603767 | 1605233 | + | GH77 |
Gene ID: HRGMv2_2788_1_1472
Type: TC
Location: 1600615 - 1601961 (+)
Type: TC
Location: 1600615 - 1601961 (+)
Gene ID: HRGMv2_2788_1_1473
Type: TC
Location: 1602046 - 1602897 (+)
Type: TC
Location: 1602046 - 1602897 (+)
Gene ID: HRGMv2_2788_1_1474
Type: TC
Location: 1602897 - 1603739 (+)
Type: TC
Location: 1602897 - 1603739 (+)
Gene ID: HRGMv2_2788_1_1475
Type: CAZyme
Location: 1603767 - 1605233 (+)
Type: CAZyme
Location: 1603767 - 1605233 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_I
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.