Cluster: HRGMv2_2788_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2788
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2788_1 | HRGMv2_2788_1_920 | 1007285 | 1009444 | - | GH112 |
| pfam | HRGMv2_2788_1 | HRGMv2_2788_1_921 | 1009484 | 1009672 | - | DUF6903 |
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_922 | 1009684 | 1010580 | - | 3.A.1.1.25 |
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_923 | 1010593 | 1011477 | - | 3.A.1.1.18 |
Gene ID: HRGMv2_2788_1_920
Type: CAZyme
Location: 1007285 - 1009444 (-)
Type: CAZyme
Location: 1007285 - 1009444 (-)
Gene ID: HRGMv2_2788_1_921
Type: pfam
Location: 1009484 - 1009672 (-)
Type: pfam
Location: 1009484 - 1009672 (-)
Gene ID: HRGMv2_2788_1_922
Type: TC
Location: 1009684 - 1010580 (-)
Type: TC
Location: 1009684 - 1010580 (-)
Gene ID: HRGMv2_2788_1_923
Type: TC
Location: 1010593 - 1011477 (-)
Type: TC
Location: 1010593 - 1011477 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_I
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.