Cluster: HRGMv2_2785_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2785
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2785_2 | HRGMv2_2785_2_100 | 107142 | 108056 | - | 3.A.1.105.9 |
| NULL(UNKNOWN) | HRGMv2_2785_2 | HRGMv2_2785_2_101 | 108078 | 109682 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2785_2 | HRGMv2_2785_2_102 | 109679 | 110389 | - | 3.A.1.147.6 |
| pfam | HRGMv2_2785_2 | HRGMv2_2785_2_103 | 110413 | 111090 | - | LiaF-like_C | LiaF-TM |
| CAZyme | HRGMv2_2785_2 | HRGMv2_2785_2_104 | 111183 | 112334 | - | CE15 |
Gene ID: HRGMv2_2785_2_100
Type: TC
Location: 107142 - 108056 (-)
Type: TC
Location: 107142 - 108056 (-)
Gene ID: HRGMv2_2785_2_101
Type:
Location: 108078 - 109682 (-)
Type:
Location: 108078 - 109682 (-)
Gene ID: HRGMv2_2785_2_102
Type: TC
Location: 109679 - 110389 (-)
Type: TC
Location: 109679 - 110389 (-)
Gene ID: HRGMv2_2785_2_103
Type: pfam
Location: 110413 - 111090 (-)
Type: pfam
Location: 110413 - 111090 (-)
Gene ID: HRGMv2_2785_2_104
Type: CAZyme
Location: 111183 - 112334 (-)
Type: CAZyme
Location: 111183 - 112334 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS172
Species
UMGS172 sp900539855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.