Cluster: HRGMv2_2785_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2785
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2785_14 | HRGMv2_2785_14_1 | 412 | 2229 | - | 2.A.35.2.1 |
| STP | HRGMv2_2785_14 | HRGMv2_2785_14_2 | 2908 | 4182 | - | AAA |
| CAZyme | HRGMv2_2785_14 | HRGMv2_2785_14_3 | 4205 | 5029 | - | GH16_3 |
| CAZyme | HRGMv2_2785_14 | HRGMv2_2785_14_4 | 5043 | 5876 | - | GH16 |
| TF | HRGMv2_2785_14 | HRGMv2_2785_14_5 | 6063 | 6884 | - | HTH_3 |
| pfam | HRGMv2_2785_14 | HRGMv2_2785_14_6 | 6987 | 7694 | - | PCMT | GidB | MTS | Methyltransf_31 |
| CAZyme | HRGMv2_2785_14 | HRGMv2_2785_14_7 | 7767 | 9044 | + | GH18 |
Gene ID: HRGMv2_2785_14_1
Type: TC
Location: 412 - 2229 (-)
Type: TC
Location: 412 - 2229 (-)
Gene ID: HRGMv2_2785_14_2
Type: STP
Location: 2908 - 4182 (-)
Type: STP
Location: 2908 - 4182 (-)
Gene ID: HRGMv2_2785_14_3
Type: CAZyme
Location: 4205 - 5029 (-)
Type: CAZyme
Location: 4205 - 5029 (-)
Gene ID: HRGMv2_2785_14_4
Type: CAZyme
Location: 5043 - 5876 (-)
Type: CAZyme
Location: 5043 - 5876 (-)
Gene ID: HRGMv2_2785_14_5
Type: TF
Location: 6063 - 6884 (-)
Type: TF
Location: 6063 - 6884 (-)
Gene ID: HRGMv2_2785_14_6
Type: pfam
Location: 6987 - 7694 (-)
Type: pfam
Location: 6987 - 7694 (-)
Gene ID: HRGMv2_2785_14_7
Type: CAZyme
Location: 7767 - 9044 (+)
Type: CAZyme
Location: 7767 - 9044 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS172
Species
UMGS172 sp900539855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.