Cluster: HRGMv2_2785_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2785
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2785_1 | HRGMv2_2785_1_69 | 68518 | 70158 | + | 3.A.1.135.5 |
| TC | HRGMv2_2785_1 | HRGMv2_2785_1_70 | 70162 | 72138 | + | 3.A.1.135.5 |
| pfam | HRGMv2_2785_1 | HRGMv2_2785_1_71 | 72348 | 73697 | + | ELFV_dehydrog | ELFV_dehydrog_N |
| pfam | HRGMv2_2785_1 | HRGMv2_2785_1_72 | 73832 | 75331 | + | GalP_UDP_transf | GalP_UDP_tr_C |
| CAZyme | HRGMv2_2785_1 | HRGMv2_2785_1_73 | 75471 | 77153 | + | GH123 |
| CAZyme | HRGMv2_2785_1 | HRGMv2_2785_1_74 | 77170 | 78768 | + | GH20 |
Gene ID: HRGMv2_2785_1_69
Type: TC
Location: 68518 - 70158 (+)
Type: TC
Location: 68518 - 70158 (+)
Gene ID: HRGMv2_2785_1_70
Type: TC
Location: 70162 - 72138 (+)
Type: TC
Location: 70162 - 72138 (+)
Gene ID: HRGMv2_2785_1_71
Type: pfam
Location: 72348 - 73697 (+)
Type: pfam
Location: 72348 - 73697 (+)
Gene ID: HRGMv2_2785_1_72
Type: pfam
Location: 73832 - 75331 (+)
Type: pfam
Location: 73832 - 75331 (+)
Gene ID: HRGMv2_2785_1_73
Type: CAZyme
Location: 75471 - 77153 (+)
Type: CAZyme
Location: 75471 - 77153 (+)
Gene ID: HRGMv2_2785_1_74
Type: CAZyme
Location: 77170 - 78768 (+)
Type: CAZyme
Location: 77170 - 78768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS172
Species
UMGS172 sp900539855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.