Cluster: HRGMv2_2783_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2783_3 | HRGMv2_2783_3_156 | 168889 | 169767 | + | GH25 |
| pfam | HRGMv2_2783_3 | HRGMv2_2783_3_157 | 169771 | 170664 | + | EamA | EamA |
| TC | HRGMv2_2783_3 | HRGMv2_2783_3_158 | 170734 | 171387 | - | 3.A.2.2.2 |
| TC | HRGMv2_2783_3 | HRGMv2_2783_3_159 | 171400 | 172782 | - | 3.A.2.2.2 |
| TC | HRGMv2_2783_3 | HRGMv2_2783_3_160 | 172779 | 174545 | - | 3.A.2.3.2 |
Gene ID: HRGMv2_2783_3_156
Type: CAZyme
Location: 168889 - 169767 (+)
Type: CAZyme
Location: 168889 - 169767 (+)
Gene ID: HRGMv2_2783_3_157
Type: pfam
Location: 169771 - 170664 (+)
Type: pfam
Location: 169771 - 170664 (+)
Gene ID: HRGMv2_2783_3_158
Type: TC
Location: 170734 - 171387 (-)
Type: TC
Location: 170734 - 171387 (-)
Gene ID: HRGMv2_2783_3_159
Type: TC
Location: 171400 - 172782 (-)
Type: TC
Location: 171400 - 172782 (-)
Gene ID: HRGMv2_2783_3_160
Type: TC
Location: 172779 - 174545 (-)
Type: TC
Location: 172779 - 174545 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.