Cluster: HRGMv2_2783_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2783_36 | HRGMv2_2783_36_7 | 9031 | 10857 | - | GH13_39 |
| CAZyme | HRGMv2_2783_36 | HRGMv2_2783_36_8 | 10933 | 13329 | - | GT35 |
| CAZyme | HRGMv2_2783_36 | HRGMv2_2783_36_9 | 13372 | 14808 | - | GT5 |
| pfam | HRGMv2_2783_36 | HRGMv2_2783_36_10 | 14805 | 15917 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2783_36 | HRGMv2_2783_36_11 | 15941 | 17125 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2783_36 | HRGMv2_2783_36_12 | 17165 | 19048 | - | CBM48 | GH13_9 |
| TC | HRGMv2_2783_36 | HRGMv2_2783_36_13 | 19568 | 21205 | + | 4.C.1.1.4 |
Gene ID: HRGMv2_2783_36_7
Type: CAZyme
Location: 9031 - 10857 (-)
Type: CAZyme
Location: 9031 - 10857 (-)
Gene ID: HRGMv2_2783_36_8
Type: CAZyme
Location: 10933 - 13329 (-)
Type: CAZyme
Location: 10933 - 13329 (-)
Gene ID: HRGMv2_2783_36_9
Type: CAZyme
Location: 13372 - 14808 (-)
Type: CAZyme
Location: 13372 - 14808 (-)
Gene ID: HRGMv2_2783_36_10
Type: pfam
Location: 14805 - 15917 (-)
Type: pfam
Location: 14805 - 15917 (-)
Gene ID: HRGMv2_2783_36_11
Type: pfam
Location: 15941 - 17125 (-)
Type: pfam
Location: 15941 - 17125 (-)
Gene ID: HRGMv2_2783_36_12
Type: CAZyme
Location: 17165 - 19048 (-)
Type: CAZyme
Location: 17165 - 19048 (-)
Gene ID: HRGMv2_2783_36_13
Type: TC
Location: 19568 - 21205 (+)
Type: TC
Location: 19568 - 21205 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.