Cluster: HRGMv2_2783_CGC31
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2783_29 | HRGMv2_2783_29_10 | 10124 | 11875 | - | 8.A.59.2.1 |
| TC | HRGMv2_2783_29 | HRGMv2_2783_29_11 | 12140 | 13861 | + | 3.A.1.1.9 |
| TC | HRGMv2_2783_29 | HRGMv2_2783_29_12 | 13976 | 14833 | + | 3.A.1.1.10 |
| TC | HRGMv2_2783_29 | HRGMv2_2783_29_13 | 14843 | 15733 | + | 3.A.1.1.9 |
| CAZyme | HRGMv2_2783_29 | HRGMv2_2783_29_14 | 15744 | 17030 | + | GH4 |
| CAZyme | HRGMv2_2783_29 | HRGMv2_2783_29_15 | 17044 | 19692 | + | CBM35 | GH97 |
| CAZyme | HRGMv2_2783_29 | HRGMv2_2783_29_16 | 19697 | 21883 | + | GH36 |
Gene ID: HRGMv2_2783_29_10
Type: TC
Location: 10124 - 11875 (-)
Type: TC
Location: 10124 - 11875 (-)
Gene ID: HRGMv2_2783_29_11
Type: TC
Location: 12140 - 13861 (+)
Type: TC
Location: 12140 - 13861 (+)
Gene ID: HRGMv2_2783_29_12
Type: TC
Location: 13976 - 14833 (+)
Type: TC
Location: 13976 - 14833 (+)
Gene ID: HRGMv2_2783_29_13
Type: TC
Location: 14843 - 15733 (+)
Type: TC
Location: 14843 - 15733 (+)
Gene ID: HRGMv2_2783_29_14
Type: CAZyme
Location: 15744 - 17030 (+)
Type: CAZyme
Location: 15744 - 17030 (+)
Gene ID: HRGMv2_2783_29_15
Type: CAZyme
Location: 17044 - 19692 (+)
Type: CAZyme
Location: 17044 - 19692 (+)
Gene ID: HRGMv2_2783_29_16
Type: CAZyme
Location: 19697 - 21883 (+)
Type: CAZyme
Location: 19697 - 21883 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.