Cluster: HRGMv2_2783_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2783_10 | HRGMv2_2783_10_37 | 42414 | 43010 | + | 9.B.106.3.2 |
| pfam | HRGMv2_2783_10 | HRGMv2_2783_10_38 | 43010 | 43216 | + | RNA_pol_Rpb6 |
| TC | HRGMv2_2783_10 | HRGMv2_2783_10_39 | 43746 | 46202 | + | 3.A.11.3.1 |
| CAZyme | HRGMv2_2783_10 | HRGMv2_2783_10_40 | 46302 | 47618 | + | GH24 |
Gene ID: HRGMv2_2783_10_37
Type: TC
Location: 42414 - 43010 (+)
Type: TC
Location: 42414 - 43010 (+)
Gene ID: HRGMv2_2783_10_38
Type: pfam
Location: 43010 - 43216 (+)
Type: pfam
Location: 43010 - 43216 (+)
Gene ID: HRGMv2_2783_10_39
Type: TC
Location: 43746 - 46202 (+)
Type: TC
Location: 43746 - 46202 (+)
Gene ID: HRGMv2_2783_10_40
Type: CAZyme
Location: 46302 - 47618 (+)
Type: CAZyme
Location: 46302 - 47618 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.