Cluster: HRGMv2_2783_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2783_10 | HRGMv2_2783_10_4 | 1751 | 4078 | - | GH3 |
| CAZyme | HRGMv2_2783_10 | HRGMv2_2783_10_5 | 4088 | 6631 | - | CBM67 | GH78 |
| TC | HRGMv2_2783_10 | HRGMv2_2783_10_6 | 6631 | 8082 | - | 2.A.2.3.3 |
Gene ID: HRGMv2_2783_10_4
Type: CAZyme
Location: 1751 - 4078 (-)
Type: CAZyme
Location: 1751 - 4078 (-)
Gene ID: HRGMv2_2783_10_5
Type: CAZyme
Location: 4088 - 6631 (-)
Type: CAZyme
Location: 4088 - 6631 (-)
Gene ID: HRGMv2_2783_10_6
Type: TC
Location: 6631 - 8082 (-)
Type: TC
Location: 6631 - 8082 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2783_10_4 | vegetarian > vegan | 2.02071 | 0.00353 |
| HRGMv2_2783_10_5 | vegetarian > omnivore | 1.16028 | 0.02254 |
| HRGMv2_2783_10_5 | vegetarian > vegan | 1.72682 | 0.00353 |
| HRGMv2_2783_10_6 | vegetarian > omnivore | 1.57078 | 0.02254 |