Cluster: HRGMv2_2783_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2783_6 | HRGMv2_2783_6_144 | 140288 | 141886 | - | 3.A.1.147.6 |
| TC | HRGMv2_2783_6 | HRGMv2_2783_6_145 | 141879 | 142595 | - | 3.A.1.147.6 |
| pfam | HRGMv2_2783_6 | HRGMv2_2783_6_146 | 142874 | 143305 | + | HSP20 |
| TF | HRGMv2_2783_6 | HRGMv2_2783_6_147 | 143631 | 144230 | - | HTH_3 |
| TC | HRGMv2_2783_6 | HRGMv2_2783_6_148 | 144836 | 146332 | + | 3.A.1.121.3 |
| pfam | HRGMv2_2783_6 | HRGMv2_2783_6_149 | 146395 | 146925 | + | DUF2284 |
| CAZyme | HRGMv2_2783_6 | HRGMv2_2783_6_150 | 147164 | 148438 | + | CE4 |
Gene ID: HRGMv2_2783_6_144
Type: TC
Location: 140288 - 141886 (-)
Type: TC
Location: 140288 - 141886 (-)
Gene ID: HRGMv2_2783_6_145
Type: TC
Location: 141879 - 142595 (-)
Type: TC
Location: 141879 - 142595 (-)
Gene ID: HRGMv2_2783_6_146
Type: pfam
Location: 142874 - 143305 (+)
Type: pfam
Location: 142874 - 143305 (+)
Gene ID: HRGMv2_2783_6_147
Type: TF
Location: 143631 - 144230 (-)
Type: TF
Location: 143631 - 144230 (-)
Gene ID: HRGMv2_2783_6_148
Type: TC
Location: 144836 - 146332 (+)
Type: TC
Location: 144836 - 146332 (+)
Gene ID: HRGMv2_2783_6_149
Type: pfam
Location: 146395 - 146925 (+)
Type: pfam
Location: 146395 - 146925 (+)
Gene ID: HRGMv2_2783_6_150
Type: CAZyme
Location: 147164 - 148438 (+)
Type: CAZyme
Location: 147164 - 148438 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900545925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.