Cluster: HRGMv2_2774_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2774
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2774_4 | HRGMv2_2774_4_55 | 64535 | 65860 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2774_4 | HRGMv2_2774_4_56 | 65904 | 67031 | + | GT28 |
| pfam | HRGMv2_2774_4 | HRGMv2_2774_4_57 | 67062 | 68594 | + | POTRA_1 |
| pfam | HRGMv2_2774_4 | HRGMv2_2774_4_58 | 68624 | 70102 | + | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_2774_4 | HRGMv2_2774_4_59 | 70160 | 72262 | - | 3.A.3.32.3 |
Gene ID: HRGMv2_2774_4_55
Type: TC
Location: 64535 - 65860 (+)
Type: TC
Location: 64535 - 65860 (+)
Gene ID: HRGMv2_2774_4_56
Type: CAZyme
Location: 65904 - 67031 (+)
Type: CAZyme
Location: 65904 - 67031 (+)
Gene ID: HRGMv2_2774_4_57
Type: pfam
Location: 67062 - 68594 (+)
Type: pfam
Location: 67062 - 68594 (+)
Gene ID: HRGMv2_2774_4_58
Type: pfam
Location: 68624 - 70102 (+)
Type: pfam
Location: 68624 - 70102 (+)
Gene ID: HRGMv2_2774_4_59
Type: TC
Location: 70160 - 72262 (-)
Type: TC
Location: 70160 - 72262 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900539885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.