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Cluster: HRGMv2_2774_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2774_40 HRGMv2_2774_40_1 383 3391 - GH2
CAZyme HRGMv2_2774_40 HRGMv2_2774_40_2 3488 5176 - GH154
CAZyme HRGMv2_2774_40 HRGMv2_2774_40_3 5176 6339 - GH88
CAZyme HRGMv2_2774_40 HRGMv2_2774_40_4 6342 8138 - GH2
TC HRGMv2_2774_40 HRGMv2_2774_40_5 8212 9072 - 3.A.1.1.11
TC HRGMv2_2774_40 HRGMv2_2774_40_6 9089 10015 - 3.A.1.1.20
STP HRGMv2_2774_40 HRGMv2_2774_40_7 10193 11512 - SBP_bac_1
TC HRGMv2_2774_40 HRGMv2_2774_40_8 11857 13674 + 8.A.59.2.1
TF HRGMv2_2774_40 HRGMv2_2774_40_9 13649 14911 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2774_40 HRGMv2_2774_40_10 14926 16722 + PL33_1
Gene ID: HRGMv2_2774_40_1
Type: CAZyme
Location: 383 - 3391 (-)
Gene ID: HRGMv2_2774_40_2
Type: CAZyme
Location: 3488 - 5176 (-)
Gene ID: HRGMv2_2774_40_3
Type: CAZyme
Location: 5176 - 6339 (-)
Gene ID: HRGMv2_2774_40_4
Type: CAZyme
Location: 6342 - 8138 (-)
Gene ID: HRGMv2_2774_40_5
Type: TC
Location: 8212 - 9072 (-)
Gene ID: HRGMv2_2774_40_6
Type: TC
Location: 9089 - 10015 (-)
Gene ID: HRGMv2_2774_40_7
Type: STP
Location: 10193 - 11512 (-)
Gene ID: HRGMv2_2774_40_8
Type: TC
Location: 11857 - 13674 (+)
Gene ID: HRGMv2_2774_40_9
Type: TF
Location: 13649 - 14911 (+)
Gene ID: HRGMv2_2774_40_10
Type: CAZyme
Location: 14926 - 16722 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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