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Cluster: HRGMv2_2774_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2774_38 HRGMv2_2774_38_7 8483 9619 - CE9
TC HRGMv2_2774_38 HRGMv2_2774_38_8 9810 10754 - 2.A.28.2.4
TC HRGMv2_2774_38 HRGMv2_2774_38_9 11217 12269 - 2.A.56.1.3
TF HRGMv2_2774_38 HRGMv2_2774_38_10 12726 13454 - GntR
pfam HRGMv2_2774_38 HRGMv2_2774_38_11 13479 14111 - Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_2774_38 HRGMv2_2774_38_12 14369 15934 - 2.A.2.3.6
CAZyme HRGMv2_2774_38 HRGMv2_2774_38_13 16032 19034 - GH3
CAZyme HRGMv2_2774_38 HRGMv2_2774_38_14 19088 21007 - GH2
Gene ID: HRGMv2_2774_38_7
Type: CAZyme
Location: 8483 - 9619 (-)
Gene ID: HRGMv2_2774_38_8
Type: TC
Location: 9810 - 10754 (-)
Gene ID: HRGMv2_2774_38_9
Type: TC
Location: 11217 - 12269 (-)
Gene ID: HRGMv2_2774_38_10
Type: TF
Location: 12726 - 13454 (-)
Gene ID: HRGMv2_2774_38_11
Type: pfam
Location: 13479 - 14111 (-)
Gene ID: HRGMv2_2774_38_12
Type: TC
Location: 14369 - 15934 (-)
Gene ID: HRGMv2_2774_38_13
Type: CAZyme
Location: 16032 - 19034 (-)
Gene ID: HRGMv2_2774_38_14
Type: CAZyme
Location: 19088 - 21007 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2774_38_9 vegan > omnivore 1.93990 0.00229
HRGMv2_2774_38_9 vegetarian > omnivore 1.71624 0.00560
HRGMv2_2774_38_10 vegan > omnivore 2.12707 0.00229
HRGMv2_2774_38_10 vegetarian > omnivore 2.11039 0.00560
HRGMv2_2774_38_11 vegan > omnivore 1.80192 0.03107
HRGMv2_2774_38_11 vegetarian > omnivore 1.41374 0.00560

🧭 Explore Read Mapping of CGC

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