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Cluster: HRGMv2_2774_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2774_2 HRGMv2_2774_2_43 48715 50553 + 3.A.16.1.2
NULL(UNKNOWN) HRGMv2_2774_2 HRGMv2_2774_2_44 50724 51359 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2774_2 HRGMv2_2774_2_45 51533 52237 + 3.A.1.125.2
TC HRGMv2_2774_2 HRGMv2_2774_2_46 52234 55506 + 3.A.1.137.2
NULL(UNKNOWN) HRGMv2_2774_2 HRGMv2_2774_2_47 55816 55953 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2774_2 HRGMv2_2774_2_48 56326 57057 - GT51
STP HRGMv2_2774_2 HRGMv2_2774_2_49 57659 58948 + Aminotran_1_2
TC HRGMv2_2774_2 HRGMv2_2774_2_50 59146 60012 - 3.A.1.1.48
TC HRGMv2_2774_2 HRGMv2_2774_2_51 60015 60989 - 3.A.1.1.4
NULL(UNKNOWN) HRGMv2_2774_2 HRGMv2_2774_2_52 61096 62535 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2774_2 HRGMv2_2774_2_53 62625 63632 - LacI
CAZyme HRGMv2_2774_2 HRGMv2_2774_2_54 64138 66573 + GH94
TC HRGMv2_2774_2 HRGMv2_2774_2_55 67158 67673 + 3.A.1.26.5
Gene ID: HRGMv2_2774_2_43
Type: TC
Location: 48715 - 50553 (+)
Gene ID: HRGMv2_2774_2_44
Type:
Location: 50724 - 51359 (+)
Gene ID: HRGMv2_2774_2_45
Type: TC
Location: 51533 - 52237 (+)
Gene ID: HRGMv2_2774_2_46
Type: TC
Location: 52234 - 55506 (+)
Gene ID: HRGMv2_2774_2_47
Type:
Location: 55816 - 55953 (+)
Gene ID: HRGMv2_2774_2_48
Type: CAZyme
Location: 56326 - 57057 (-)
Gene ID: HRGMv2_2774_2_49
Type: STP
Location: 57659 - 58948 (+)
Gene ID: HRGMv2_2774_2_50
Type: TC
Location: 59146 - 60012 (-)
Gene ID: HRGMv2_2774_2_51
Type: TC
Location: 60015 - 60989 (-)
Gene ID: HRGMv2_2774_2_52
Type:
Location: 61096 - 62535 (-)
Gene ID: HRGMv2_2774_2_53
Type: TF
Location: 62625 - 63632 (-)
Gene ID: HRGMv2_2774_2_54
Type: CAZyme
Location: 64138 - 66573 (+)
Gene ID: HRGMv2_2774_2_55
Type: TC
Location: 67158 - 67673 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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