Cluster: HRGMv2_2774_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2774
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2774_31 | HRGMv2_2774_31_25 | 22945 | 25206 | - | GT35 |
| TF | HRGMv2_2774_31 | HRGMv2_2774_31_26 | 25500 | 26357 | + | HTH_AraC | HTH_AraC |
| TF | HRGMv2_2774_31 | HRGMv2_2774_31_27 | 26418 | 27443 | - | LacI |
| TC | HRGMv2_2774_31 | HRGMv2_2774_31_28 | 27731 | 29413 | + | 4.A.1.1.11 |
| pfam | HRGMv2_2774_31 | HRGMv2_2774_31_29 | 29420 | 30238 | + | Exo_endo_phos |
| CAZyme | HRGMv2_2774_31 | HRGMv2_2774_31_30 | 30255 | 31757 | + | GH77 |
Gene ID: HRGMv2_2774_31_25
Type: CAZyme
Location: 22945 - 25206 (-)
Type: CAZyme
Location: 22945 - 25206 (-)
Gene ID: HRGMv2_2774_31_26
Type: TF
Location: 25500 - 26357 (+)
Type: TF
Location: 25500 - 26357 (+)
Gene ID: HRGMv2_2774_31_27
Type: TF
Location: 26418 - 27443 (-)
Type: TF
Location: 26418 - 27443 (-)
Gene ID: HRGMv2_2774_31_28
Type: TC
Location: 27731 - 29413 (+)
Type: TC
Location: 27731 - 29413 (+)
Gene ID: HRGMv2_2774_31_29
Type: pfam
Location: 29420 - 30238 (+)
Type: pfam
Location: 29420 - 30238 (+)
Gene ID: HRGMv2_2774_31_30
Type: CAZyme
Location: 30255 - 31757 (+)
Type: CAZyme
Location: 30255 - 31757 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900539885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.