Cluster: HRGMv2_2774_CGC18
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2774
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2774_30 | HRGMv2_2774_30_6 | 4082 | 5476 | - | 3.A.2.1.5 |
| TC | HRGMv2_2774_30 | HRGMv2_2774_30_7 | 5670 | 6518 | - | 3.A.2.1.5 |
| TC | HRGMv2_2774_30 | HRGMv2_2774_30_8 | 6536 | 8056 | - | 3.A.2.1.5 |
| pfam | HRGMv2_2774_30 | HRGMv2_2774_30_9 | 8108 | 8647 | - | OSCP |
| pfam | HRGMv2_2774_30 | HRGMv2_2774_30_10 | 8644 | 9150 | - | ATP-synt_B |
| TC | HRGMv2_2774_30 | HRGMv2_2774_30_11 | 9187 | 9468 | - | 3.A.2.1.2 |
| TC | HRGMv2_2774_30 | HRGMv2_2774_30_12 | 9522 | 10265 | - | 3.A.2.1.5 |
| pfam | HRGMv2_2774_30 | HRGMv2_2774_30_13 | 10269 | 10769 | - | ATP-synt_I |
| pfam | HRGMv2_2774_30 | HRGMv2_2774_30_14 | 10792 | 11052 | - | ATPase_gene1 |
| CAZyme | HRGMv2_2774_30 | HRGMv2_2774_30_15 | 11509 | 12927 | - | GT5 |
| pfam | HRGMv2_2774_30 | HRGMv2_2774_30_16 | 13091 | 14218 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2774_30 | HRGMv2_2774_30_17 | 14212 | 15405 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2774_30 | HRGMv2_2774_30_18 | 15493 | 17757 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_2774_30_6
Type: TC
Location: 4082 - 5476 (-)
Type: TC
Location: 4082 - 5476 (-)
Gene ID: HRGMv2_2774_30_7
Type: TC
Location: 5670 - 6518 (-)
Type: TC
Location: 5670 - 6518 (-)
Gene ID: HRGMv2_2774_30_8
Type: TC
Location: 6536 - 8056 (-)
Type: TC
Location: 6536 - 8056 (-)
Gene ID: HRGMv2_2774_30_9
Type: pfam
Location: 8108 - 8647 (-)
Type: pfam
Location: 8108 - 8647 (-)
Gene ID: HRGMv2_2774_30_10
Type: pfam
Location: 8644 - 9150 (-)
Type: pfam
Location: 8644 - 9150 (-)
Gene ID: HRGMv2_2774_30_11
Type: TC
Location: 9187 - 9468 (-)
Type: TC
Location: 9187 - 9468 (-)
Gene ID: HRGMv2_2774_30_12
Type: TC
Location: 9522 - 10265 (-)
Type: TC
Location: 9522 - 10265 (-)
Gene ID: HRGMv2_2774_30_13
Type: pfam
Location: 10269 - 10769 (-)
Type: pfam
Location: 10269 - 10769 (-)
Gene ID: HRGMv2_2774_30_14
Type: pfam
Location: 10792 - 11052 (-)
Type: pfam
Location: 10792 - 11052 (-)
Gene ID: HRGMv2_2774_30_15
Type: CAZyme
Location: 11509 - 12927 (-)
Type: CAZyme
Location: 11509 - 12927 (-)
Gene ID: HRGMv2_2774_30_16
Type: pfam
Location: 13091 - 14218 (-)
Type: pfam
Location: 13091 - 14218 (-)
Gene ID: HRGMv2_2774_30_17
Type: pfam
Location: 14212 - 15405 (-)
Type: pfam
Location: 14212 - 15405 (-)
Gene ID: HRGMv2_2774_30_18
Type: CAZyme
Location: 15493 - 17757 (-)
Type: CAZyme
Location: 15493 - 17757 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900539885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.