Cluster: HRGMv2_2774_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2774
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2774_25 | HRGMv2_2774_25_13 | 12255 | 13400 | - | GH105 |
| CAZyme | HRGMv2_2774_25 | HRGMv2_2774_25_14 | 13405 | 14961 | - | GH28 |
| TF | HRGMv2_2774_25 | HRGMv2_2774_25_15 | 15186 | 16004 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2774_25 | HRGMv2_2774_25_16 | 16110 | 16967 | - | 3.A.1.1.11 |
| TC | HRGMv2_2774_25 | HRGMv2_2774_25_17 | 16978 | 17907 | - | 3.A.1.1.11 |
| TC | HRGMv2_2774_25 | HRGMv2_2774_25_18 | 18112 | 19503 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_2774_25_13
Type: CAZyme
Location: 12255 - 13400 (-)
Type: CAZyme
Location: 12255 - 13400 (-)
Gene ID: HRGMv2_2774_25_14
Type: CAZyme
Location: 13405 - 14961 (-)
Type: CAZyme
Location: 13405 - 14961 (-)
Gene ID: HRGMv2_2774_25_15
Type: TF
Location: 15186 - 16004 (+)
Type: TF
Location: 15186 - 16004 (+)
Gene ID: HRGMv2_2774_25_16
Type: TC
Location: 16110 - 16967 (-)
Type: TC
Location: 16110 - 16967 (-)
Gene ID: HRGMv2_2774_25_17
Type: TC
Location: 16978 - 17907 (-)
Type: TC
Location: 16978 - 17907 (-)
Gene ID: HRGMv2_2774_25_18
Type: TC
Location: 18112 - 19503 (-)
Type: TC
Location: 18112 - 19503 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900539885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.