Cluster: HRGMv2_2772_CGC33
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2772
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_2477 | 2713675 | 2715069 | - | 3.A.2.1.5 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_2478 | 2715097 | 2715945 | - | 3.A.2.1.5 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_2479 | 2715963 | 2717483 | - | 3.A.2.1.5 |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_2480 | 2717535 | 2718074 | - | OSCP |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_2481 | 2718071 | 2718577 | - | ATP-synt_B |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_2482 | 2718614 | 2718895 | - | 3.A.2.1.2 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_2483 | 2718949 | 2719692 | - | 3.A.2.1.5 |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_2484 | 2719696 | 2720196 | - | ATP-synt_I |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_2485 | 2720219 | 2720479 | - | ATPase_gene1 |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_2486 | 2720937 | 2722355 | - | GT5 |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_2487 | 2722522 | 2723649 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_2488 | 2723643 | 2724836 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_2489 | 2724924 | 2727086 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_2772_1_2477
Type: TC
Location: 2713675 - 2715069 (-)
Type: TC
Location: 2713675 - 2715069 (-)
Gene ID: HRGMv2_2772_1_2478
Type: TC
Location: 2715097 - 2715945 (-)
Type: TC
Location: 2715097 - 2715945 (-)
Gene ID: HRGMv2_2772_1_2479
Type: TC
Location: 2715963 - 2717483 (-)
Type: TC
Location: 2715963 - 2717483 (-)
Gene ID: HRGMv2_2772_1_2480
Type: pfam
Location: 2717535 - 2718074 (-)
Type: pfam
Location: 2717535 - 2718074 (-)
Gene ID: HRGMv2_2772_1_2481
Type: pfam
Location: 2718071 - 2718577 (-)
Type: pfam
Location: 2718071 - 2718577 (-)
Gene ID: HRGMv2_2772_1_2482
Type: TC
Location: 2718614 - 2718895 (-)
Type: TC
Location: 2718614 - 2718895 (-)
Gene ID: HRGMv2_2772_1_2483
Type: TC
Location: 2718949 - 2719692 (-)
Type: TC
Location: 2718949 - 2719692 (-)
Gene ID: HRGMv2_2772_1_2484
Type: pfam
Location: 2719696 - 2720196 (-)
Type: pfam
Location: 2719696 - 2720196 (-)
Gene ID: HRGMv2_2772_1_2485
Type: pfam
Location: 2720219 - 2720479 (-)
Type: pfam
Location: 2720219 - 2720479 (-)
Gene ID: HRGMv2_2772_1_2486
Type: CAZyme
Location: 2720937 - 2722355 (-)
Type: CAZyme
Location: 2720937 - 2722355 (-)
Gene ID: HRGMv2_2772_1_2487
Type: pfam
Location: 2722522 - 2723649 (-)
Type: pfam
Location: 2722522 - 2723649 (-)
Gene ID: HRGMv2_2772_1_2488
Type: pfam
Location: 2723643 - 2724836 (-)
Type: pfam
Location: 2723643 - 2724836 (-)
Gene ID: HRGMv2_2772_1_2489
Type: CAZyme
Location: 2724924 - 2727086 (-)
Type: CAZyme
Location: 2724924 - 2727086 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.