Cluster: HRGMv2_2772_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2772
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_83 | 97224 | 98741 | - | 2.A.21.2.5 |
| TF | HRGMv2_2772_1 | HRGMv2_2772_1_84 | 99021 | 99752 | - | GntR |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_85 | 99894 | 100145 | + | TPP_enzyme_M |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_86 | 100208 | 100759 | - | GH77 |
| TF | HRGMv2_2772_1 | HRGMv2_2772_1_87 | 100908 | 101765 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_88 | 102024 | 104285 | + | GT35 |
Gene ID: HRGMv2_2772_1_83
Type: TC
Location: 97224 - 98741 (-)
Type: TC
Location: 97224 - 98741 (-)
Gene ID: HRGMv2_2772_1_84
Type: TF
Location: 99021 - 99752 (-)
Type: TF
Location: 99021 - 99752 (-)
Gene ID: HRGMv2_2772_1_85
Type: pfam
Location: 99894 - 100145 (+)
Type: pfam
Location: 99894 - 100145 (+)
Gene ID: HRGMv2_2772_1_86
Type: CAZyme
Location: 100208 - 100759 (-)
Type: CAZyme
Location: 100208 - 100759 (-)
Gene ID: HRGMv2_2772_1_87
Type: TF
Location: 100908 - 101765 (-)
Type: TF
Location: 100908 - 101765 (-)
Gene ID: HRGMv2_2772_1_88
Type: CAZyme
Location: 102024 - 104285 (+)
Type: CAZyme
Location: 102024 - 104285 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.