Cluster: HRGMv2_2772_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2772
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_2311 | 2539317 | 2540462 | - | GH105 |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_2312 | 2540467 | 2542023 | - | GH28 |
| TF | HRGMv2_2772_1 | HRGMv2_2772_1_2313 | 2542239 | 2543057 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_2314 | 2543142 | 2543999 | - | 3.A.1.1.11 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_2315 | 2544010 | 2544939 | - | 3.A.1.1.11 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_2316 | 2545144 | 2546535 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_2772_1_2311
Type: CAZyme
Location: 2539317 - 2540462 (-)
Type: CAZyme
Location: 2539317 - 2540462 (-)
Gene ID: HRGMv2_2772_1_2312
Type: CAZyme
Location: 2540467 - 2542023 (-)
Type: CAZyme
Location: 2540467 - 2542023 (-)
Gene ID: HRGMv2_2772_1_2313
Type: TF
Location: 2542239 - 2543057 (+)
Type: TF
Location: 2542239 - 2543057 (+)
Gene ID: HRGMv2_2772_1_2314
Type: TC
Location: 2543142 - 2543999 (-)
Type: TC
Location: 2543142 - 2543999 (-)
Gene ID: HRGMv2_2772_1_2315
Type: TC
Location: 2544010 - 2544939 (-)
Type: TC
Location: 2544010 - 2544939 (-)
Gene ID: HRGMv2_2772_1_2316
Type: TC
Location: 2545144 - 2546535 (-)
Type: TC
Location: 2545144 - 2546535 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.