Cluster: HRGMv2_2772_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2772
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_1269 | 1389224 | 1389892 | + | GH23 |
| peptidase | HRGMv2_2772_1 | HRGMv2_2772_1_1270 | 1389908 | 1391311 | + | M18.UPW |
| TF | HRGMv2_2772_1 | HRGMv2_2772_1_1271 | 1391420 | 1392265 | + | MerR |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_1272 | 1392272 | 1393114 | - | CE4 |
| STP | HRGMv2_2772_1 | HRGMv2_2772_1_1273 | 1393187 | 1393945 | - | Response_reg | Spo0A_C |
| peptidase | HRGMv2_2772_1 | HRGMv2_2772_1_1274 | 1394062 | 1395309 | - | S55.001 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_1275 | 1396319 | 1397773 | + | 2.A.66.2.23 |
Gene ID: HRGMv2_2772_1_1269
Type: CAZyme
Location: 1389224 - 1389892 (+)
Type: CAZyme
Location: 1389224 - 1389892 (+)
Gene ID: HRGMv2_2772_1_1270
Type: peptidase
Location: 1389908 - 1391311 (+)
Type: peptidase
Location: 1389908 - 1391311 (+)
Gene ID: HRGMv2_2772_1_1271
Type: TF
Location: 1391420 - 1392265 (+)
Type: TF
Location: 1391420 - 1392265 (+)
Gene ID: HRGMv2_2772_1_1272
Type: CAZyme
Location: 1392272 - 1393114 (-)
Type: CAZyme
Location: 1392272 - 1393114 (-)
Gene ID: HRGMv2_2772_1_1273
Type: STP
Location: 1393187 - 1393945 (-)
Type: STP
Location: 1393187 - 1393945 (-)
Gene ID: HRGMv2_2772_1_1274
Type: peptidase
Location: 1394062 - 1395309 (-)
Type: peptidase
Location: 1394062 - 1395309 (-)
Gene ID: HRGMv2_2772_1_1275
Type: TC
Location: 1396319 - 1397773 (+)
Type: TC
Location: 1396319 - 1397773 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.