Cluster: HRGMv2_2772_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2772
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_1063 | 1172399 | 1173304 | - | 8.A.21.2.2 |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_1064 | 1173355 | 1173804 | - | NfeD |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_1065 | 1174062 | 1175918 | - | GH13_39 |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_1066 | 1175994 | 1178399 | - | GT35 |
Gene ID: HRGMv2_2772_1_1063
Type: TC
Location: 1172399 - 1173304 (-)
Type: TC
Location: 1172399 - 1173304 (-)
Gene ID: HRGMv2_2772_1_1064
Type: pfam
Location: 1173355 - 1173804 (-)
Type: pfam
Location: 1173355 - 1173804 (-)
Gene ID: HRGMv2_2772_1_1065
Type: CAZyme
Location: 1174062 - 1175918 (-)
Type: CAZyme
Location: 1174062 - 1175918 (-)
Gene ID: HRGMv2_2772_1_1066
Type: CAZyme
Location: 1175994 - 1178399 (-)
Type: CAZyme
Location: 1175994 - 1178399 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.