Cluster: HRGMv2_2772_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2772
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_915 | 1029369 | 1030253 | + | 3.A.1.1.18 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_916 | 1030266 | 1031162 | + | 3.A.1.1.25 |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_917 | 1031174 | 1031362 | + | DUF6903 |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_918 | 1031402 | 1033561 | + | GH112 |
Gene ID: HRGMv2_2772_1_915
Type: TC
Location: 1029369 - 1030253 (+)
Type: TC
Location: 1029369 - 1030253 (+)
Gene ID: HRGMv2_2772_1_916
Type: TC
Location: 1030266 - 1031162 (+)
Type: TC
Location: 1030266 - 1031162 (+)
Gene ID: HRGMv2_2772_1_917
Type: pfam
Location: 1031174 - 1031362 (+)
Type: pfam
Location: 1031174 - 1031362 (+)
Gene ID: HRGMv2_2772_1_918
Type: CAZyme
Location: 1031402 - 1033561 (+)
Type: CAZyme
Location: 1031402 - 1033561 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.