Cluster: HRGMv2_2772_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2772
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_474 | 530920 | 532515 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_2772_1 | HRGMv2_2772_1_475 | 532542 | 533333 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_476 | 533391 | 534506 | - | Acyl_transf_3 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_477 | 534907 | 536355 | + | 4.C.1.1.6 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_478 | 536376 | 537848 | + | 4.C.1.1.6 |
Gene ID: HRGMv2_2772_1_474
Type: CAZyme
Location: 530920 - 532515 (-)
Type: CAZyme
Location: 530920 - 532515 (-)
Gene ID: HRGMv2_2772_1_475
Type:
Location: 532542 - 533333 (-)
Type:
Location: 532542 - 533333 (-)
Gene ID: HRGMv2_2772_1_476
Type: pfam
Location: 533391 - 534506 (-)
Type: pfam
Location: 533391 - 534506 (-)
Gene ID: HRGMv2_2772_1_477
Type: TC
Location: 534907 - 536355 (+)
Type: TC
Location: 534907 - 536355 (+)
Gene ID: HRGMv2_2772_1_478
Type: TC
Location: 536376 - 537848 (+)
Type: TC
Location: 536376 - 537848 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.