Cluster: HRGMv2_2755_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2755
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2755_12 | HRGMv2_2755_12_2 | 2485 | 2901 | - | 8.A.58.2.12 |
| pfam | HRGMv2_2755_12 | HRGMv2_2755_12_3 | 3036 | 3710 | - | UDG |
| CAZyme | HRGMv2_2755_12 | HRGMv2_2755_12_4 | 3822 | 5126 | + | GH18 |
Gene ID: HRGMv2_2755_12_2
Type: TC
Location: 2485 - 2901 (-)
Type: TC
Location: 2485 - 2901 (-)
Gene ID: HRGMv2_2755_12_3
Type: pfam
Location: 3036 - 3710 (-)
Type: pfam
Location: 3036 - 3710 (-)
Gene ID: HRGMv2_2755_12_4
Type: CAZyme
Location: 3822 - 5126 (+)
Type: CAZyme
Location: 3822 - 5126 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900548625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2755_12_2 | vegetarian > omnivore | 7.90072 | 0.00229 |
| HRGMv2_2755_12_2 | vegetarian > vegan | 4.12974 | 0.00065 |
| HRGMv2_2755_12_3 | vegetarian > vegan | 1.47837 | 0.00065 |