Cluster: HRGMv2_2748_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2748
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_215 | 237014 | 238516 | - | 2.A.50.2.1 |
| pfam | HRGMv2_2748_1 | HRGMv2_2748_1_216 | 238544 | 238897 | - | DUF2304 |
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_217 | 238894 | 239613 | - | GT2 |
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_218 | 239811 | 241028 | - | GT4 |
| pfam | HRGMv2_2748_1 | HRGMv2_2748_1_219 | 241047 | 242222 | - | Epimerase_2 |
| pfam | HRGMv2_2748_1 | HRGMv2_2748_1_220 | 242237 | 243436 | - | Epimerase | Polysacc_synt_C |
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_221 | 243433 | 244494 | - | 9.B.18.2.1 |
Gene ID: HRGMv2_2748_1_215
Type: TC
Location: 237014 - 238516 (-)
Type: TC
Location: 237014 - 238516 (-)
Gene ID: HRGMv2_2748_1_216
Type: pfam
Location: 238544 - 238897 (-)
Type: pfam
Location: 238544 - 238897 (-)
Gene ID: HRGMv2_2748_1_217
Type: CAZyme
Location: 238894 - 239613 (-)
Type: CAZyme
Location: 238894 - 239613 (-)
Gene ID: HRGMv2_2748_1_218
Type: CAZyme
Location: 239811 - 241028 (-)
Type: CAZyme
Location: 239811 - 241028 (-)
Gene ID: HRGMv2_2748_1_219
Type: pfam
Location: 241047 - 242222 (-)
Type: pfam
Location: 241047 - 242222 (-)
Gene ID: HRGMv2_2748_1_220
Type: pfam
Location: 242237 - 243436 (-)
Type: pfam
Location: 242237 - 243436 (-)
Gene ID: HRGMv2_2748_1_221
Type: TC
Location: 243433 - 244494 (-)
Type: TC
Location: 243433 - 244494 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.