Cluster: HRGMv2_2748_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2748
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_2422 | 2653218 | 2654693 | + | 4.A.1.1.7 |
| sulfatase | HRGMv2_2748_1 | HRGMv2_2748_1_2423 | 2654899 | 2655627 | + | S1_9 |
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_2424 | 2655647 | 2656774 | + | CE9 |
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_2425 | 2657526 | 2658860 | - | 2.A.25.1.4 |
Gene ID: HRGMv2_2748_1_2422
Type: TC
Location: 2653218 - 2654693 (+)
Type: TC
Location: 2653218 - 2654693 (+)
Gene ID: HRGMv2_2748_1_2423
Type: sulfatase
Location: 2654899 - 2655627 (+)
Type: sulfatase
Location: 2654899 - 2655627 (+)
Gene ID: HRGMv2_2748_1_2424
Type: CAZyme
Location: 2655647 - 2656774 (+)
Type: CAZyme
Location: 2655647 - 2656774 (+)
Gene ID: HRGMv2_2748_1_2425
Type: TC
Location: 2657526 - 2658860 (-)
Type: TC
Location: 2657526 - 2658860 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.