Cluster: HRGMv2_2748_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2748
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_102 | 112279 | 113019 | - | 3.A.1.3.20 |
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_103 | 113012 | 113836 | - | 3.A.1.3.20 |
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_104 | 113917 | 114822 | - | 3.A.1.3.20 |
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_105 | 115007 | 116737 | - | 2.A.114.1.3 |
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_106 | 117117 | 118685 | + | GH13_44 |
Gene ID: HRGMv2_2748_1_102
Type: TC
Location: 112279 - 113019 (-)
Type: TC
Location: 112279 - 113019 (-)
Gene ID: HRGMv2_2748_1_103
Type: TC
Location: 113012 - 113836 (-)
Type: TC
Location: 113012 - 113836 (-)
Gene ID: HRGMv2_2748_1_104
Type: TC
Location: 113917 - 114822 (-)
Type: TC
Location: 113917 - 114822 (-)
Gene ID: HRGMv2_2748_1_105
Type: TC
Location: 115007 - 116737 (-)
Type: TC
Location: 115007 - 116737 (-)
Gene ID: HRGMv2_2748_1_106
Type: CAZyme
Location: 117117 - 118685 (+)
Type: CAZyme
Location: 117117 - 118685 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.