Cluster: HRGMv2_2748_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2748
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_1758 | 1857610 | 1860612 | - | GT39 |
| pfam | HRGMv2_2748_1 | HRGMv2_2748_1_1759 | 1860637 | 1862034 | - | tRNA-synt_1e | DALR_2 | tRNA-synt_1g | tRNA-synt_1g | CysS_C |
| NULL(UNKNOWN) | HRGMv2_2748_1 | HRGMv2_2748_1_1760 | 1862111 | 1864054 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_1761 | 1864096 | 1864671 | - | 4.F.1.1.7 |
Gene ID: HRGMv2_2748_1_1758
Type: CAZyme
Location: 1857610 - 1860612 (-)
Type: CAZyme
Location: 1857610 - 1860612 (-)
Gene ID: HRGMv2_2748_1_1759
Type: pfam
Location: 1860637 - 1862034 (-)
Type: pfam
Location: 1860637 - 1862034 (-)
Gene ID: HRGMv2_2748_1_1760
Type:
Location: 1862111 - 1864054 (-)
Type:
Location: 1862111 - 1864054 (-)
Gene ID: HRGMv2_2748_1_1761
Type: TC
Location: 1864096 - 1864671 (-)
Type: TC
Location: 1864096 - 1864671 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.