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Cluster: HRGMv2_2748_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2748_1 HRGMv2_2748_1_1594 1673679 1676153 - GH2
CAZyme HRGMv2_2748_1 HRGMv2_2748_1_1595 1676259 1677158 - GH125
pfam HRGMv2_2748_1 HRGMv2_2748_1_1596 1677155 1677508 - Glyco_hydro_125
NULL(UNKNOWN) HRGMv2_2748_1 HRGMv2_2748_1_1597 1677508 1679238 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2748_1 HRGMv2_2748_1_1598 1679255 1680100 - 3.A.1.1.18
TC HRGMv2_2748_1 HRGMv2_2748_1_1599 1680097 1680999 - 3.A.1.1.28
Gene ID: HRGMv2_2748_1_1594
Type: CAZyme
Location: 1673679 - 1676153 (-)
Gene ID: HRGMv2_2748_1_1595
Type: CAZyme
Location: 1676259 - 1677158 (-)
Gene ID: HRGMv2_2748_1_1596
Type: pfam
Location: 1677155 - 1677508 (-)
Gene ID: HRGMv2_2748_1_1597
Type:
Location: 1677508 - 1679238 (-)
Gene ID: HRGMv2_2748_1_1598
Type: TC
Location: 1679255 - 1680100 (-)
Gene ID: HRGMv2_2748_1_1599
Type: TC
Location: 1680097 - 1680999 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2748_1_1595 vegetarian > omnivore 1.31250 0.00364
HRGMv2_2748_1_1598 vegetarian > omnivore 1.82551 0.00364
HRGMv2_2748_1_1599 vegetarian > omnivore 1.50937 0.00364

🧭 Explore Read Mapping of CGC

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